Package: vhica 0.2.9
vhica: Vertical and Horizontal Inheritance Consistence Analysis
The "Vertical and Horizontal Inheritance Consistence Analysis" method is described in the following publication: "VHICA: a new method to discriminate between vertical and horizontal transposon transfer: application to the mariner family within Drosophila" by G. Wallau. et al. (2016) <doi:10.1093/molbev/msv341>. The purpose of the method is to detect horizontal transfers of transposable elements, by contrasting the divergence of transposable element sequences with that of regular genes.
Authors:
vhica_0.2.9.tar.gz
vhica_0.2.9.zip(r-4.7)vhica_0.2.9.zip(r-4.6)vhica_0.2.9.zip(r-4.5)
vhica_0.2.9.tgz(r-4.6-any)vhica_0.2.9.tgz(r-4.5-any)
vhica_0.2.9.tar.gz(r-4.7-any)vhica_0.2.9.tar.gz(r-4.6-any)
vhica_0.2.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
vhica/json (API)
| # Install 'vhica' in R: |
| install.packages('vhica', repos = c('https://lerouzic.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/lerouzic/vhica/issues
Last updated from:b234380a89. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 109 | ||
| source / vignettes | OK | 151 | ||
| linux-release-x86_64 | OK | 91 | ||
| macos-release-arm64 | OK | 145 | ||
| macos-oldrel-arm64 | OK | 145 | ||
| windows-devel | OK | 66 | ||
| windows-release | OK | 81 | ||
| windows-oldrel | OK | 65 | ||
| wasm-release | OK | 88 |
Exports:CUBdivread.vhica
Dependencies:
